In my research, I focus on problems in bioinformatics and computational biology. In the past, I have done research in the area of computational geometry, especially on problems motivated by applications in computer graphics, robotics, and geographic information systems. In my Ph.D. thesis, I studied the problem of hidden-surface removal. Here is a list of my publications.
- ICoN: Integration using Co-attention across Biological Networks
Nure Tasnina and T. M. Murali
bioRxiv, in review, 2024. - Current and future directions in network biology
Marinka Zitnik, Michelle M. Li, Aydin Wells, Kimberly Glass, Deisy Morselli Gysi, Arjun Krishnan, T. M. Murali, Predrag Radivojac, Sushmita Roy, Anaïs Baudot, Serdar Bozdag, Danny Z. Chen, Lenore Cowen, Kapil Devkota, Anthony Gitter, Sara Gosline, Pengfei Gu, Pietro H. Guzzi, Heng Huang, Meng Jiang, Ziynet Nesibe Kesimoglu, Mehmet Koyuturk, Jian Ma, Alexander R. Pico, Nataša Pržulj, Teresa M. Przytycka, Benjamin J. Raphael, Anna Ritz, Roded Sharan, Yang Shen, Mona Singh, Donna K. Slonim, Hanghang Tong, Xinan Holly Yang, Byung-Jun Yoon, Haiyuan Yu, Tijana Milenković
arXiv, in review, 2023. - Comparative Transcriptomic and Phenotypic Analysis of Induced Pluripotent Stem Cell Hepatocyte-Like Cells and Primary Human Hepatocytes
Neeti N Gandhi, Lauren Wills, Kyle Akers, Yiqi Su, Parker Niccum, T. M. Murali, Padmavathy Rajagopalan
Cell and Tissue Research, in press, 2024 - Predictive Models of Long COVID
Blessy Antony, Hannah Blau, Elena Casiraghi, Johanna J Loomba, Tiffany J Callahan, Bryan J Laraway, Kenneth J Wilkins, Corneliu C Antonescu, Giorgio Valentini, Andrew E Williams, Peter N Robinson, Justin T Reese, and T. M. Murali
EBioMedicine, 96, 104777, 2023. - Computational Construction of Toxicant Signaling Networks
Jeffrey Law, Sophia Orbach, Bronson Weston, Peter Steele, Padmavathy Rajagopalan, and T. M. Murali
Chemical Research in Toxicology, 36, 1267-1277, 2023. - Generalisable long COVID subtypes: findings from the NIH N3C and RECOVER programmes
Justin T. Reese, Hannah Blau, Elena Casiraghi, Timothy Bergquist, Johanna J. Loomba, Tiffany J. Callahan, Bryan Laraway, Corneliu Antonescu, Ben Coleman, Michael Gargano, Kenneth J. Wilkins, Luca Cappelletti, Tommaso Fontana, Nariman Ammar, Blessy Antony, T. M. Murali, J. Harry Caufield, Guy Karlebach, Julie A. McMurry, Andrew Williams, Richard Moffitt, Jineta Banerjee, Anthony E. Solomonides, Hannah Davis, Kristin Kostka, Giorgio Valentini, David Sahner, Christopher G. Chute, Charisse Madlock-Brown, Melissa A. Haendel, and Peter N. Robinson
eBioMedicine, 87, 104413, 2023 - Integrating Multimodal Data through Interpretable Heterogeneous Ensembles
Yan Chak Li, Linhua Wang, Jeffrey N. Law, T. M. Murali, and Gaurav Pandey
Bioinformatics Advances, 2, vbac065, 2022 - Flud: a hybrid crowd-algorithm approach for visualizing biological networks Presentation at ISMB 2019
Aditya Bharadwaj, David Gwizdala, Yoonjin Kim, Kurt Luther, and T. M. Murali
ACM Transactions of Computer-Human Interactions, 29, 1-53, 2022 - Interpretable Network Propagation with Application to Expanding the Repertoire of Human Proteins that Interact with SARS-CoV-2
Jeffrey N. Law, Kyle Akers, Nure Tasnina, Catherine M. Della Santina, Shay Deutsch, Meghana Kshirsagar, Judith Klein-Seetharaman, Mark Crovella, Padmavathy Rajagopalan, Simon Kasif, and T. M. Murali
GigaScience, 10, giab082, 2021 - Modeling and Analysis of the Macronutrient Signaling Network in Budding Yeast
Amogh P. Jalihal, Pavel Kraikivski, T. M. Murali, John Tyson
Molecular Biology of the Cell, 32, 2021 - Gene Regulatory Network Inference in Single-Cell Biology
Kyle Akers and T. M. Murali
Current Opinion in Systems Biology, 26, 87-97, 2021 - Protein sequence models for prediction and comparative analysis of the SARS-CoV-2−human interactome
Meghana Kshirsagar, Nure Tasnina, Michael D. Ward, Jeffrey N. Law, T. M. Murali, Juan M. Lavista Ferres, Gregory R. Bowman, Judith Klein-Seetharaman
Pacific Symposium on Biocomputing, 154-165`, 2021. - Accurate and Efficient Gene Function Prediction using a Multi-Bacterial Network
Jeffrey N. Law, Shiv D. Kale, and T. M. Murali
Bioinformatics, 37, 800-806, 2021 - Genetic interactions derived from high-throughput phenotyping of 7,350 yeast cell cycle mutants
Jenna E. Gallegos, Neil R. Adames, Mark F. Rogers, Pavel Kraikivski, Aubrey Ibele, Kevin Nurzynski-Loth, Eric Kudlow, T. M. Murali, John Tyson, and Jean Peccoud
Systems Biology and Applications, a Nature Partner journal, 6, Article number 11, 2020 - Benchmarking algorithms for gene regulatory network inference from single-cell transcriptomic data Talk at ISMB 2020
Aditya Pratapa, Amogh P. Jalihal, Jeffrey N. Law, Aditya Bharadwaj, and T. M. Murali
Nature Methods, 17, 147-154, 2020 - Hypergraph-based connectivity measures for signaling pathway topologies
Nicholas Franzese, Adam R. Groce, T. M. Murali, and Anna Ritz
PLoS Computational Biology, 15(10), e1007384, 2019 - Reconstructing Signaling Pathways Using Regular-Language Constrained Paths
Mitchell J. Wagner, Aditya Pratapa, and T. M. Murali
Bioinformatics 35(14), i624–i633, 2019. Special issue on 2019 International Conference on Intelligent Systems for Molecular Biology. - Connectivity Measures for Signaling Pathway Topologies
Nicholas Franzese, Adam Groce, T. M. Murali, and Anna Ritz, Great Lakes Bioinformatics Conference, 2019. - Flud: a hybrid crowd-algorithm approach for visualizing biological networks
Aditya Bharadwaj, David Gwizdala, Yoonjin Kim, Kurt Luther, and T. M. Murali
Where is the Human? Bridging the Gap Between AI and HCI, CHI 2019 Workshop, 2019. - Large-scale protein function prediction using heterogeneous ensembles
Linhua Wang, Jeffrey Law, Shiv D. Kale, T. M. Murali, and Gaurav Pandey, F1000 Research, 7 (ISCB Comm J), 1577, 2018. - Guest Editorial for the special section of papers presented at the 6th ACM Conference on Bioinformatics, Computational Biology, and Health Informatics
T. M. Murali
IEEE/ACM Transactions on Computational Biology and Bioinformatics, 15(4), 1036, 2018. - Efficient Synthesis of Mutants Using Genetic Crosses bioRxiv version with proofs
Aditya Pratapa, Amogh Jalihal, S. S. Ravi, and T. M. Murali
Proceedings of the 9th ACM Conference on Bioinformatics, Computational Biology, and Health Informatics, 53-62, 2018. - Transcriptomic Analysis of Hepatic Cells in Multicellular Organotypic Liver Models
Allison N. Tegge, Richard R. Rodrigues, Adam L. Larkin, Lucas Vu, T. M. Murali, and Padmavathy Rajagopalan
Scientific Reports, 8, 11306, 2018. - Automating the PathLinker app for Cytoscape
Li Jun Huang, Jeffrey N. Law, and T. M. Murali
F1000 Research, 7, 727, 2018 - CrossPlan: Systematic Planning of Genetic Crosses to Validate Mathematical Models
Aditya Pratapa, Neil Adames, Pavel Kraikivski, John J. Tyson, Jean Peccoud, and T. M. Murali
Bioinformatics, 34 (13), 2237-2244, 2018 - CrowdLayout: Crowdsourced Design and Evaluation of Biological Network Visualizations
Divit P. Singh, Lee Lisle, T. M. Murali, and Kurt Luther
2018 ACM Conference on Human Factors in Computing Systems (CHI’18), paper 232, 2018 - GraphSpace: Stimulating Interdisciplinary Collaborations in Network Biology
Aditya Bharadwaj, Divit P. Singh, Anna Ritz, Allison N. Tegge, Christopher L. Poirel, Pavel Kraikivski, Neil Adames, Kurt Luther, Shiv D. Kale, Jean Peccoud, John J. Tyson, and T. M. Murali
Bioinformatics, 13 (19), 3134-3136, 2017 - Pathway Analysis with Signaling Hypergraphs
Anna Ritz, Brendan N. Avent, and T. M. Murali
IEEE/ACM Transactions on Computational Biology and Bioinformatics, 14(5), 1042-1055, 2017. - The PathLinker app: Connect the dots in protein interaction networks Cytoscape app Code
Daniel P. Gil, Jeffrey N. Law, and T. M. Murali
F1000 Research, 6, 58, 2017. - XTalkDB: A Database of Signaling Pathway Crosstalk XTalkDB
Sarah Sam, Joelle Teel, Allison N. Tegge, Aditya Bharadwaj, and T. M. Murali
Nucleic Acids Research, 45 (D1), D432-D439, 2016. - Unstable Communities in Network Ensembles
Ahsanur Rahman, Steve Jan, Hyunju Kim, B. Aditya Prakash, and T. M. Murali
Proceedings of the 2016 SIAM International Conference on Data Mining, 504-512, 2016. - Pathways on Demand: Automatic Reconstruction of Human Signaling Networks Supplement Software Graphs on GraphSpace
Anna Ritz, Christopher L. Poirel, Allison N. Tegge, Nicholas Sharp, Allison Powell, Kelsey Simmons, Shiv D. Kale, and T. M. Murali
npj:Systems Biology and Applications, a Nature Partner Journal, 2, Article number 16002, 2016. - From START to FINISH: Computational Analysis of Cell Cycle Control in Budding Yeast
Pavel Kraikivski, Katherine C. Chen, Teeraphan Laomettachit, T. M. Murali, and John J. Tyson
npj Systems Biology and Applications, a Nature Partner Journal, 1, Article number 15016, 2015. - Mining Unstable Communities from Network Ensembles
Ahsanur Rahman, Steve Jan, Hyunju Kim, B. Aditya Prakash, and T. M. Murali
2015 IEEE International Conference on Data Mining Workshop (ICDMW), appeared in the 5th IEEE Workshop on Data Mining in Networks, 508-515, 2015. - XTalk: a Path-Based Approach to Identifying Crosstalk between Signaling Pathways Software Graphs on GraphSpace
Allison N. Tegge, Nicholas Sharp, and T. M. Murali
Bioinformatics, 32(2), 242-251, 2015. - Experimental validation of an integrated model of the budding yeast START transition Summary on Atlas of Science
Neil R. Adames, P. Logan Schuck, Katherine C. Chen, T. M. Murali, John J. Tyson, and Jean Peccoud
In press, Molecular Biology of the Cell, special issue on Quantitative Biology, 26(22), 3966-3984, 2015. - Pathway Analysis with Signaling Hypergraphs Poster
Anna Ritz and T. M. Murali
Proceedings of the 5th ACM Conference on Bioinformatics, Computational Biology, and Health Informatics, 249-258, 2014. - Signaling Hypergraphs
Anna Ritz, Allison Tegge, Hyunju Kim, Christopher L. Poirel, and T. M. Murali
Trends in Biotechnology, 32(7), 356-362, 2014. - Reverse Engineering Molecular Hypergraphs
Ahsanur Rahman, Christopher L. Poirel, David J. Badger, Craig Estep, and T. M. Murali
IEEE/ACM Transactions on Computational Biology and Bioinformatics, 10(5), 1113-1124, 2013. (Full version of the conference publication.) - Designing a Multi-cellular Organotypic 3D Liver Model with a Detachable, Nanoscale Polymeric Space of Disse
Adam L. Larkin, Richard R. Rodrigues, T. M. Murali, and Padmavathy Rajagopalan
Tissue Engineering Part C: Methods, 19(11), 875-884, 2013. - Computational approaches for discovery of common immunomodulators in fungal infections: towards broad-spectrum immunotherapeutic interventions
Yared H Kidane, Christopher Lawrence, and T. M. Murali
BMC Microbiology, 13, 224, 2013. - Summarizing cellular responses as biological process networks
Christopher D. Lasher, Padma Rajagopalan, and T. M. Murali
BMC Systems Biology, 7, 68, 2013. - Systems Biology Characterization of Engineered Tissues
Padmavathy Rajagopalan, Simon Kasif, and T. M. Murali
Annual Reviews of Biomedical Engineering, 15, 55-70, 2013. - Top-Down Network Analysis to Drive Bottom-Up Modeling of Physiological Processes Supplementary website Graphs on GraphSpace
Christopher L. Poirel, Richard R. Rodrigues, Katherine C. Chen, John J. Tyson, and T. M. Murali
Journal of Computational Biology, 20(5), 409-418, 2013, special issue on the 5th Annual RECOMB Conference on Regulatory and Systems Genomics, with DREAM Challenges. - The Landscape of Host Transcriptional Response Programs Commonly Perturbed by Bacterial Pathogens:Towards Host-Oriented Broad-Spectrum Drug Targets Supplementary website
Yared H. Kidane, Christopher Lawrence, and T. M. Murali
PLoS One, 8(3), e58553, 2013 - Reconciling Differential Gene Expression Data with Molecular Interaction Networks
Christopher L. Poirel, Ahsanur Rahman, Richard R. Rodrigues, Arjun Krishnan, Jacqueline R. Addesa, and T. M. Murali.
Bioinformatics, 29(5), 622-629, 2013. - Reverse Engineering Molecular Hypergraphs Supplementary website
Ahsanur Rahman, Christopher L. Poirel, David J. Badger, and T. M. Murali
Proceedings of ACM Conference on Bioinformatics, Computational Biology, and Biomedicine 2012, 68-75, October 7-10, 2012, Orlando FL
Winner of the best paper award - Guest Editor’s Introduction: Computationally Driven Experimental Biology
T. M. Murali
Computer, 45(3), 22-23, 2012 - Network-Based Functional Enrichment Supplementary website
Christopher L. Poirel, Clifford Conley Owens III, and T. M. Murali
BMC Bioinformatics, 12(Suppl 13), S14, 2011, part of the supplement on the 10th International Conference on Bioinformatics - Network-Based Prediction and Analysis of HIV Dependency Factors
T. M. Murali, Matthew D. Dyer, David Badger, Brett M. Tyler, and Michael G. Katze
PLoS Computational Biology, 7(9), e1002164, 2011
Please also see the coverage at ProteoMonitor - Sensitive Detection of Pathway Perturbations in Cancers
Corban G. Rivera, Brett M. Tyler, and T. M. Murali
BMC Bioinformatics, 13(Suppl 3), S9, 2012, part of the supplement on the ACM Conference on Bioinformatics, Computational Biology and Biomedicine 2011 - Supervised Prediction and Learning of Physical Interactions between Human and HIV Proteins
Matthew D. Dyer, T. M. Murali, and Bruno W. Sobral
Infection, Genetics, and Evolution, 11, 917-923, 2011 - Discovering Networks of Perturbed Biological Processes in Hepatocyte Cultures
Christopher D. Lasher, Padma Rajagopalan, and T. M. Murali
PLoS One, 6(1), e15247, 2011 - A Comparative Study of Genome Wide Transcriptional Profiles of Primary Hepatocytes in Collagen Sandwich and Monolayer Cultures Supplementary website
Yeonhee Kim, Christopher D. Lasher, Logan M. Milford, T. M. Murali, and Padmavathy Rajagopalan
Tissue Engineering Part C Methods, 16(6), 1449-1460, 2010 - Cellular Response Networks
Christopher D. Lasher, Christopher L. Poirel, and T. M. Murali
Invited chapter in The Problem Solving Handbook for Computational Biology and Bioinformatics, edited by Lenwood S. Heath and Naren Ramakrishnan, 233-250, Springer-Verlag, 2010 - The human-bacterial pathogen protein interaction networks of Bacillus anthracis, Francisella tularensis, and Yersinia pestis
Matthew D. Dyer, Chris Neff, Max Dufford, Corban G. Rivera, Donna Shattuck, Josep Bassaganya-Riera, T. M. Murali, and Bruno W. Sobral
PLoS One, 5(8), e12089, 2010 - Computational Systems Biology
T. M. Murali and Srinivas Aluru
Invited chapter in Algorithms and Theory of Computation Handbook, second edition, edited by Mikhail J. Atallah and Marina Blanton, Chapter 32, CRC Press, 2009. - Finding Conserved Protein Interaction Modules using GraphHopper Slides
Corban G. Rivera and T. M. Murali
Proceedings of the 1st International Conference on Bioinformatics and Computational Biology (BICoB), volume 5462 of Lecture Notes in Computer Science, 67-78, 2009 - Capturing Truthiness: Mining Truth Tables in Binary Datasets
Clifford Conley Owens III, T. M. Murali, and Naren Ramakrishnan
24th Annual ACM Symposium on Applied Computing, 1467-1474, 2009 - PIG: The Pathogen Interaction Gateway The PIG website
Tim Driscoll, Matthew D. Dyer, T. M. Murali, and Bruno W. Sobral
Nucleic Acids Research, 37(Database issue), D647-D650, 2009. - Network Legos: Building Blocks of Cellular Wiring Diagrams
T. M. Murali and Corban G. Rivera
Journal of Computational Biology, 15(7), 829-844, 2008. - Atomic level computational identification of ligand migration pathways between solvent and heme iron in myoglobin
Jory Z. Ruscio, Deept Kumar, Maulik Shukla, Michael G. Prisant, T. M. Murali and Alexey Onufriev
Proceedings of the National Academy of Sciences, 105(27) 27, 9204-9209, 2008. - Compositional Mining of Multi-relational Biological Datasets
Ying Jin, T. M. Murali, and Naren Ramakrishnan
ACM Transactions on Knowledge Discovery from Data, 2(1), 1-35, 2008 - The Landscape of Human Proteins Interacting with Viruses and Other Pathogens
Matthew D. Dyer, T. M. Murali, and Bruno W. Sobral
PLoS Pathogens, 4(2), e32, 2008 - Expression Divergence of Tandemly Arrayed Genes in Human and Mouse
Valia Shoja, T. M. Murali, and Liqing Zhang
Comparative and Functional Genomics, 2007, article ID 60964, 2007. - Computational Prediction of Host-Pathogen Protein-Protein Interactions Website Slides (17 MB)
Matthew D. Dyer, T. M. Murali and Bruno W. Sobral
Bioinformatics, 23(13), i159-i166, issue on Proceedings of the 15th Annual International Conference on Intelligent Systems for Molecular Biology (ISMB), 2007 - Network Legos: Building Blocks of Cellular Wiring Diagrams Slides of RECOMB talk, Slides of longer (1 hour) talk
T. M. Murali and Corban G. Rivera
Proceedings of the Eleventh Annual International Conference on Research in Computational Molecular Biology (RECOMB), volume 4453 of Lecture Notes in Computer Science, 47-61, 2007 - The Art of Gene Function Prediction Website
T. M. Murali, Chang-Jiun Wu, and Simon Kasif
Nature Biotechnology, 24, 1474–1475, 2006 - Automatic Layout and Visualisation of Biclusters Website
Gregory A. Grothaus, Adeel Mufti, and T. M. Murali
Algorithms for Molecular Biology, 1, 15, 2006 - Response Diversity of Arabidopsis thaliana Ecotypes in Elevated [CO2] in the Field
Pinghua Li, Allan Sioson, Shrinivasrao Mane, Alexander Ulanov, Gregory Grothaus, Lenwood Heath, T. M. Murali, Hans Bohnert, and Ruth Grene
Plant Molecular Biology, 62, 593–609, 2006 - Automatic Layout and Visualisation of Biclusters Website
Gregory A. Grothaus, Adeel Mufti, and T. M. Murali
In Proceedings of the 6th SIGKDD Workshop on Data Mining in Biology, 23–30, 2006 - VIRGO: Computational Prediction of Gene Functions The VIRGO web server
Naveed Massjouni, Corban Rivera, and T. M. Murali
Nucleic Acids Research, Web server issue, 4, W340-W344, 2006 - XcisClique: Analysis of Regulatory Bicliques Website
Amrita Pati, Cecilia Vasquez-Robinet, Lenwood S. Heath, Ruth Grene, and T. M. Murali
BMC Bioinformatics, 7, 218, 2006 - Gene Expression Module Discovery Using Gibbs Sampling
Chang-Jiun Wu, Yutao Fu, T. M. Murali, and Simon Kasif
Genome Informatics, 15, 239–248, 2004 - Whole Genome Annotation using Evidence Integration in Functional Linkage Networks Website
Ulas Karaoz, T. M. Murali, Stan Letovsky, Yu Zheng, Chunming Ding, Charles R. Cantor, and Simon Kasif
Proceedings of the National Academy of Sciences, 101, 2888–2893, 2004. - RankGene: Identification of Diagnostic Genes Based on Expression Data
Yang Su, T. M. Murali, Vladimir Pavlovic, Michael Schaffer, and Simon Kasif,
Bioinformatics, 19, 2003, 1578-1579. - Extracting Conserved Gene Expression Motifs from Gene Expression Data
T. M. Murali and Simon Kasif
In Proceedings of the Pacific Symposium on Biocomputing, 77–88, 2003 - A Monte-Carlo Algorithm for Fast Projective Clustering
Magda Procopiuc, Michael Jones, Pankaj Agarwal, and T. M. Murali
In Proceedings of the 2002 International Conference on Management of Data, 418–427, 2002 - New Similarity Measures between Polylines with Applications to Morphing and Polygon Sweeping
Alon Efrat, Leonidas J. Guibas, Sariel Har-Peled, Joseph S. B. Mitchell, and T. M. Murali,
Discrete and Computational Geometry, 28, 2002, 535–569
This paper combines the results of Morphing between Polylines and Sweeping Simple Polygons with a Chain of Guards. - Morphing between Polylines
Alon Efrat, Leonidas J. Guibas, Sariel Har-Peled, and T. M. Murali
In Proceedings of the 12th Annual ACM-SIAM Symposium on Discrete Algorithms, 680–689, 2001 - Sweeping Simple Polygons with a Chain of Guards
Alon Efrat, Leonidas J. Guibas, Sariel Har-Peled, David C. Lin, Joseph S. B. Mitchell, and T. M. Murali
In Proceedings of the 11th Annual ACM-SIAM Symposium on Discrete Algorithms, 927–936, 2000 - Cylindrical Static and Kinetic Binary Space Partitions
Pankaj K. Agarwal, Leonidas J. Guibas, T. M. Murali, and Jeffrey Scott Vitter
Computational Geometry: Theory and Applications, 16, 2000, 103–127 - Binary Space Partitions for Fat Rectangles
Pankaj K. Agarwal, Edward F. Grove, T. M. Murali, and Jeffrey Scott Vitter
SIAM Journal on Computing, 29, 1422–1448, 2000 - Planning Robot Motion Strategies for Efficient Model Construction
Hector Hugo Gonzalez-Banos, Alon Efrat, Jean-Claude Latombe, Eric Mao, and T. M. Murali
In Proceedings of the 9th International Symposium of Robotics Research, 1999, 345–352 - The Object Complexity Model for Hidden-Surface Removal
Edward F. Grove, T. M. Murali. and Jeffrey Scott Vitter
International Journal of Computational Geometry and Applications, 9, 207-217, 1999 - Constructing Binary Space Partitions for Orthogonal Rectangles in Practice
T. M. Murali, Pankaj K. Agarwal, and Jeffrey Scott Vitter
In Proceedings of the 6th Annual European Symposium on Algorithms, 211–222, 1998 - Efficient Hidden-Surface Removal in Theory and in Practice
Ph. D. Thesis, Department of Computer Science, Brown University, June 1998 - I/O-Efficient Algorithms for Contour Line Extraction and Planar Graph Blocking
Pankaj K. Agarwal, Lars Arge, T. M. Murali, Kasturi R. Varadarajan, and Jeffrey Scott Vitter
In Proceedings of the 9th Annual ACM-SIAM Symposium on Discrete Algorithms, 211–222, 1998 - Cylindrical Static and Kinetic Binary Space Partitions
Pankaj K. Agarwal, Leonidas J. Guibas, T. M. Murali, and Jeffrey Scott Vitter
Proceedings of the 13th Annual ACM Symposium on Computational Geometry, 39-48, 1997 - Practical Techniques for Constructing Binary Space Partitions for Orthogonal Rectangles
Pankaj K. Agarwal, T. M. Murali, and Jeffrey Scott Vitter
In Proceedings of the 13th Annual ACM Symposium on Computational Geometry, 382–384, 1997 - Consistent Solid and Boundary Representations from Arbitrary Polygonal Data
T. M. Murali and Thomas A. Funkhouser
In Proceedings of the 1997 Symposium on Interactive 3D Graphics, Providence, Rhode Island, April 1997
Since the size of this paper is more than 21MB when uncompressed, you can download it in three forms:- The full paper (a little more than 21Mb when uncompressed),
- The paper without the colour page (200 Kb when uncompressed), or
- The colour page (nearly 21Mb when uncompressed).
- Binary Space Partitions for Fat Rectangles
Pankaj K. Agarwal, Edward F. Grove, T. M. Murali, and Jeffrey Scott Vitter
Proceedings of the 37th IEEE Annual Symposium on Foundations of Computer Science, 482-491, 1996 - The Object Complexity Model for Hidden-Surface Removal
Edward F. Grove, T. M. Murali. and Jeffrey Scott Vitter
Proceedings of the Seventh Canadian Conference on Computational Geometry, 273-278, 1995